Meets Thursday 9:00-10:00 Physics Room 1131
Instructor: Prof. Keith Lidke
Room 1140, Physics and Astronomye-mail: klidke@unm.edu
phone: (505)277-0302
Overview
The format will be one presentation per week either a research report or a journal paper presentation. Topics will be any aspect of fluorescence super-resolution imaging, single particle tracking, single molecule imaging or spectral imaging. We may also have a few full-hour talks by external speakers during the semester.Registration is not required for attendance or participation, but please register if you can.
Grading
Credit for the seminar requires attendance and one research or journal presentation.Fall Semester Schedule
| Date | Presenter | Topic |
|---|---|---|
| 21-Aug | Organizational Meeting | |
| 28-Aug | Peter Relich | Journal Article:
"SimpleSTORM: a fast, self-calibrating reconstruction algorithm for localization microscopy"
|
| 4-Sept | Sheng Liu | Multi-Target SuperResolution Imaging
|
| 11-Sept | Marjolein Meddens | Journal Articles: "Software for bead-based registration of selective plane illumination microscopy data" "Efficient bayesian-based multiview deconvolution" |
| 18-Sept | Mark Olah | "Single Molecule Analysis Tools in C++ and Matlab"
|
| 25-Sept | Julian Antolin | Journal Article:
Faster STORM using compressed sensing
|
| 2-Oct | Peter Relich | "Estimating the Diffusion Constant from Noisy Trajectories"
|
| 9-Oct | Keith Lidke | "Reversible Jump Markov Chain Monte-Carlo"
|
| 16-Oct | Sheng Liu | Journal Presentation:
Analyzing proteome topology and function by automated multidimensional fluorescence microscopy
|
| 23-Oct | Mark Olah | Journal Presentation: TBD
Classification of dynamical diffusion states in single molecule tracking microscopy.
|
| 30-Oct | Marjolein Meddens | "Single-Cell Light Sheet Microscopy"
|
| 6-Nov | Peter Relich | Journal Presentation:
Nanoscale Organization of Mitochondrial Microcompartments Revealed by Combining Tracking and Localization Microscopy
Dynamic Submicroscopic Signaling Zones Revealed by Pair Correlation Tracking and Localization Microscopy |
| 13-Nov | Farzin Farzam | Second Quantized Super-resolution Imaging
|
| 20-Nov | Sheng Liu | Research Presentation: TBD
|
| 27-Nov | Mark Olah | Research Presentation: TBD
|
| 4-Dec | Peter Relich | Research Presentation: TBD
|
| 11-Dec | Julian Antolin | Research Presentation: TBD
|
| 18-Dec | Sheng Liu, Marjolein Meddens | Journal Presentation
|